模拟生命演化的奇特方式:基因的自私之旅 Veritasium 2025-11-01

粪便之谜与利他主义悖论

如果你想知道一个人是否真正理解演化(Evolution: 生物种群在世代中发生遗传性状改变的过程),只需问他们一个奇怪的问题:为什么粪便闻起来很臭?

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If you want to know if someone really understands evolution, just ask them this one weird question. Why does poop smell bad?

因为里面有细菌,可能是微生物群,肠道里的废物,我们吃的食物,或者化学物质。屁不总是臭的。你认为它客观上闻起来很臭吗?是的,我认为是。那么你觉得它对苍蝇来说闻起来怎么样?它们喜欢。它们爱它。动物都喜欢臭味。

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Because it has bacteria in it, probably the microbiome, trash from the gut, the food we eat, or the chemicals. Farts don't always smell bad. Do you think it objectively smells bad? Yes, I think so. How do you think it smells to flies? They like it. They love it. Animals love stinky things.

粪便对苍蝇来说闻起来很香,因为它富含营养;苍蝇将其作为食物。但它也充满了可能对人类构成生命威胁的细菌。所以,粪便对我们来说闻起来很臭的真正原因是,如果有人觉得它闻起来很香,他们很可能会生重病,死亡,从而无法将他们的基因传递下去。毕竟,这关乎适者生存(Survival of the fittest: 自然选择的核心原则,指最适应环境的个体或基因更容易存活和繁殖)。但究竟是什么的适者生存呢?

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Poop smells good to flies because it is full of nutrients; they use it as food. But it is also full of bacteria that can be life-threatening to humans. So the real reason poop smells bad to us is because if anyone ever thought it smelled good, they would probably get really sick, die, and not pass on their genes. After all, it's about survival of the fittest. But survival of the fittest what?

大多数人认为自然选择(Natural Selection: 生物演化机制,指环境对生物性状的选择作用)是关于最适应环境的个体动物的生存。个体。这说得通。毕竟,最适应环境的个体有更高的生存几率,因此也更有可能将它们的基因传递下去。所以,每个个体都应该尽其所能地生存和繁殖,也就是说,它应该自私。

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Most people think of natural selection as being about the survival of the fittest individual animal. Individual. Which makes sense. Individuals best adapted to their environment have increased odds of survival, and therefore a higher likelihood of passing on their genes. So it follows that each individual should do everything it can to survive and reproduce. That is, it should be selfish.

但如果这是真的,那么你如何解释以下现象?工蜂会蜇食捕食者以保护蜂巢,即使这可能导致它们死亡。雌性工蚁是无生育能力的,所以它们无法繁殖,但无论如何,它们一生都在为蚁群工作,直到死去。猴子会收养孤儿,狼会把肉带给不出去捕猎的同伴,松鼠会发出警报声来警告其他同伴附近有捕食者。所以,如果自然选择完全是关于自私的个体,为什么我们在自然界中观察到如此多的利他主义(Altruism: 一种行为,指个体为了他人的利益而牺牲自己的利益)?

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But if that's true, then how do you explain this? Worker bees will sting predators to protect the hive, even though it might kill them in the process. Female worker ants are sterile, so they can't reproduce, but regardless, they work for the colony for their entire lives until they die. Monkeys adopt orphans, wolves bring meat to non-hunting members of the pack, and squirrels can let out alarm calls to warn others about nearby predators. So if natural selection is all about selfish individuals, why do we observe so much altruism in nature?

是物种的生存,能够适应的物种。我认为通常是物种的生存。所以是物种的生存。但最适应的物种或群体的生存也说不通。想想自然选择发生所需要的东西。你需要某种能多次复制自身,创造副本的东西,然后你需要一个筛选过程,其中一些副本被淘汰,一些茁壮成长并创造更多副本。群体或物种的问题在于它们通常不会复制自身。所以你几乎永远不会看到群体的副本与其他群体的副本竞争,以看哪个群体胜出。

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The survival is of the species that can adapt. I think generally the species. For the survival of the species. So it's the survival of the species. But survival of the fittest species or the fittest group also doesn't work. Think about what you need for natural selection to occur. You need something that replicates itself many times over, creating copies, and then you need a pruning process, whereby some of those copies get eliminated and some thrive to go on and create more copies. The problem with groups or species is that they don’t typically make copies of themselves. So you almost never get copies of groups fighting other copies of groups to see which groups win out.

所以,如果不是最适应的个体的生存,也不是最适应的群体的生存,那到底是什么呢?

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So if it's not survival of the fittest individual and it's not survival of the fittest group, then what is it?

从简单分子到第一个复制子

为了解释这一点,我想带你进行一次小小的旅程,一直回到地球的开端。我们现在所处的地方,什么都没有。嗯,也不是真的什么都没有,但没什么有趣的。只有像这些团块一样的简单事物。这个可能是一个二氧化碳分子,也可能是氰化物。我们不确定它们是什么,但我们知道这些化合物非常简单。所以现在,它们只是漂浮在我们虚空中的团块。事实上,我们在这段旅程中遇到的很多东西都只是假说。地球的早期历史仍然是个谜,所以请记住这一点。

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Well, to explain that, I want to take you on a little journey, all the way back to the beginnings of the Earth. Where we are now, there is nothing. Well, not really nothing, but nothing interesting. There are only simple things, like these blobs. This one might be a carbon dioxide molecule, or it might be cyanide. We don't know for sure what they are, but we do know that these compounds are very simple. So for now, they'll just be blobs floating around our void. In fact, much of what we'll encounter along our journey here are just hypotheses. A lot of Earth's early history is still a mystery, so keep that in mind.

现在,我们的团块时不时会获得多余的能量,也许来自一道紫外线,或者附近的某个热源。这是我们虚空的第一个重大升级:多余的能量,因为它允许我们的团块相互作用。大多数时候,这种相互作用什么也引不起,但有时这些团块可以结合成更复杂的化合物。

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Now, every so often, our blobs get a surplus of energy, maybe from a ray of UV light or a nearby hot source. This is the first major upgrade to our void, excess energy, as it allows our blobs to interact with each other. And most of the time, this interaction leads to nothing, but sometimes these blobs can combine into more complicated compounds.

这是一个简单的模拟例子,我们只有四个红色团块。现在,它们都是独立的粒子,但每当我们向前推进一个时间步,假设有10%的机会所有四个团块结合成一个红色巨型团块。现在想象这个巨型团块不是很稳定。它存在的每个时间步,都有95%的机会分解回四个较小的团块。如果我们向混合物中添加更多这些红色团块,你会注意到它们很少会聚集在一起。平均而言,巨型团块只存在大约10%的时间。但如果我们将巨型团块分解的机会减少到只有1%,虚空就会突然充满它们。

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Here's a simple simulated example, where we only have four red blobs. Right now, they are all individual particles, but each time step we move forward, let's say there's a 10% chance that all four combine into one red mega-blob. And now imagine this mega-blob isn't very stable. For every time step it's alive, it has a 95% chance of falling apart back into the four smaller blobs. If we add more of these red blobs into the mix, you'll notice that they rarely ever come together. On average, a mega-blob only exists around 10% of the time. But if we were to reduce the chances of the mega-blobs dissolving to only 1%, the void would suddenly be filled with them.

这个事实暗示了一个支配我们虚空的重要法则:稳定性法则(Law of Stability: 指在演化过程中,更稳定的结构或系统更容易存在和持久)。不稳定的团块会分解并消失,稳定的团块则会持续存在。现在,看看如果我们大幅加速会发生什么,也许每秒几年,甚至几百万年。你可以看到我们的团块不断获得随机的能量冲击,所以它们与其他团块结合形成更复杂的化合物。大多数尝试都失败并分解,但每隔一段时间,纯粹偶然地,你会得到一个比组成它的团块更稳定的化合物。这并不是因为团块想要建造更复杂的结构,只是因为这些新的配置恰好在环境中更有利。

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This fact hints at an important law that governs our void, the law of stability. Unstable blobs fall apart and vanish. Stable ones endure. Now, watch what happens if we speed this up dramatically, maybe a couple of years per second, maybe even a couple million. You can see our blobs keep getting random jolts of energy, so they combine with others to form more complex compounds. Most attempts fail and fall apart, but every so often, by pure chance, you get a compound that is more stable than the blobs it's made of. This doesn't happen because the blobs want to build more complex structures. It's just because these new configurations happen to be more favorable in the environment.

现在,当这些复杂的化合物变得足够丰富时,它们也有机会结合,使我们的虚空变得越来越复杂。有一天,偶然地,这导致了一个极其独特的形状形成,它具有一个特殊的属性。你看,组成它的团块恰好能从周围环境中吸引相似的团块。这个红色团块总是吸引绿色团块,这个紫色团块总是吸引黄色团块,一点一点地,所有这些团块都吸引它们的对立面,直到它们的对应物突然咔嗒一声就位,紧挨着原始形状。

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And now when these complicated compounds become abundant enough, they too get a chance to combine, making our void increasingly complex. And one day, by accident, this causes an extremely unique shape to form, one with a special property. See, the blobs it's made of just happen to attract similar blobs from the surrounding environment. This red blob always attracts green blobs, and this purple blob always attracts yellow ones, and piece by piece, all these blobs attract their opposites until their counterparts suddenly snap into position next to the original shape.

现在,这个形状继续做同样的事情。它的绿色团块吸引红色团块,黄色团块吸引紫色团块,直到另一个形状再次咔嗒一声就位。这个新形状看起来与原始形状一模一样。刚才完全自发发生的事情就是复制(Replication: 遗传物质或生物体自我复制的过程)。一个形状变成了两个。这标志着第一个复制子(Replicator: 能够自我复制的实体,如基因或早期分子)的诞生。

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Now, this shape goes on to do the same thing. Its green blobs attract red ones and yellow ones attract the purple until another shape yet again snaps into position. This new shape looks exactly like the original. What just happened fully spontaneously is replication. One shape became two. This marks the birth of the first replicator.

我们不确切知道这个复制子长什么样。它可能是一个独立的分子,也可能是一组协同工作的分子。今天对此有很多争论,所以我们用一个字符来代表复制子。这个怎么样?完美。请记住,它仍然只是一个没有生命、没有意图或目的的分子。

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We don't know exactly what this replicator looked like. It might've been a single standalone molecule or a group of molecules that worked together to replicate. There's a lot of debate on this today, so instead, let's represent the replicator as a character. How about this one here? Perfect. Keep in mind it's still just a lifeless molecule, one without any intent or purpose.

你可能认为复制子形成的几率极小,但在我们拥有数亿年时间可供玩耍的虚空中,对我们来说似乎不可能的事情变得几乎不可避免。而且,复制子只需要出现一次。一旦它出现,它就可以利用环境中可用的简单化合物,以更快的速度复制自身。于是它就这样做了,直到完全填满我们的虚空。至少,这是你所期望的,但这个过程中存在一个缺陷。

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Now, you might think that the chances for the replicator to form were extremely unlikely, but in our void, where we have hundreds of millions of years to play with, what might seem impossible to us becomes virtually inevitable. And the thing is, the replicator only has to arise once. Once it's here, it can take the simpler compounds available in the environment to copy itself at a much faster pace. And so it does that, until it entirely fills our void.

你看,在复制子征服虚空的过程中,它的一个副本犯了一个错误。也许在复制过程中一道杂散的紫外线击中了它,或者复制子使用了不该使用的构建块。结果,我们得到的是一个新形状,它与它的父代略有不同,因此它的属性也可能略有不同。这个错误可能是有害的。例如,它可能使副本的稳定性降低。它可能是有益的,使副本更擅长复制,或者它可能是中性的,不会以任何有意义的方式改变复制子。这标志着我们虚空中的最后一个里程碑:突变(Mutation: 基因或染色体结构发生改变,导致遗传性状变异)。

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At least, that's what you'd expect, but there is a flaw in the process. See, during the replicator's conquest of the void, one of its copies makes a mistake. Perhaps a stray ray of UV light hits it during the replication process, or the replicator uses a building block it wasn't supposed to. As a result, what we're left with is a new shape, which is slightly different from its parent, and so its properties might be slightly different too. This error might be harmful. For example, it might make the copy less stable. It could be beneficial, making the copy better at replicating, or it could be neutral, not changing the replicator in any meaningful way. This marks the final milestone in our void, mutation.

许多种类的复制子现在占据了虚空,它们所做的是复制自身。问题是它们都需要相同的有限资源,所以我们的虚空变成了一个战场。那么哪个复制子会赢?虚空会偏爱什么样的属性?

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Many species of replicators now occupy the void, and what they do is they replicate themselves. The problem is they all need the same limited resources, and so our void turns into a battleground. So which replicator will win? What kind of properties will the void favor?

赞助商:Hostinger与自动化工作流

如果你想运行自己的模拟,或者需要一个地方来运行你的代码,那么今天的赞助商Hostinger就是你的不二之选。假设你想跟踪日常的科学新闻。手动筛选数千篇文章以找到最重要的故事几乎是不可能的!但Hostinger可以让你轻松实现自动化。你可以使用n8n(Workflow Automation Tool: 一个开源的自动化工作流工具),但你需要一个地方来托管它。

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Well, let's try to simulate what happens. Now, if you’re looking to run your own simulations, or need a place to run your own code look no further than today’s sponsor — Hostinger. Say you wanted to keep track of everyday science news. Manually filtering through thousands of articles for the most important stories would be almost impossible! But Hostinger lets you easily automate this. You can use n8n, a platform that lets you automate tasks, but you need a place to host it.

在Hostinger的虚拟专用服务器(Virtual Private Server, VPS: 一种虚拟化技术,将一台物理服务器分割成多个独立的虚拟服务器)上托管n8n工作流是最简单、最具成本效益和最安全的方式!它就像你在云端租用的一台强大电脑。

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And the easiest, most price-effective and secure place to host n8n workflows is on a Virtual Private Server or VPS from Hostinger! It’s like a powerful computer you rent on the cloud.

以下是如何创建文章筛选器:工作流可以从门户列表抓取每一篇新的科学文章。然后,它可以将文章发送给Chat GPT(Generative Pre-trained Transformer: 一种基于人工智能的大型语言模型)来总结其内容。最后,你可以将这些快速摘要添加到Notion(All-in-one Workspace: 一个集笔记、项目管理、知识库等功能于一体的工作空间)的看板中。

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So here’s how you can create an article scrubber: The workflow can grab every new science article from a list of portals. Then, it can send the articles to Chat GPT to summarize their content. And finally, you can add these quick summaries to a board in Notion.

使用Hostinger预装的n8n模板,设置只需一键完成,你就可以开始创建工作流了。通过在Hostinger VPS上托管n8n,你可以获得运行工作流所需的所有资源,24/7全天候顺畅运行!此外,你可以同时运行无限数量的工作流。想象一下,通过Hostinger上的自动化,你可以做多少事情,节省多少时间。他们现在正在进行黑色星期五促销,所以千万不要错过!扫描此二维码或访问hostinger.com/veritasiumn8n,并使用代码VERITASIUM在促销价格之上获得额外折扣!感谢Hostinger赞助本视频的这一部分,现在我们回到模拟。

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Using Hostinger’s pre-installed n8n template, the setup only takes one click, and you’re good to start creating workflows. By hosting n8n on a Hostinger VPS, you get all the resources needed to run your workflow smoothly, 24/7! Plus, you can have unlimited workflows running simultaneously. Imagine the things you could do and the time you can save with automations on Hostinger. They’re having a Black Friday sale right now, so don’t miss out! Scan this QR code or visit hostinger.com/veritasiumn8n and use the code VERITASIUM to get an extra discount on top of the sale prices! Thanks to Hostinger for sponsoring this part of the video, and now back to our simulation.

模拟复制子之战

为了模拟复制子之战可能是什么样子,让我们为每个复制子分配简化的特性,从第一个开始。这个复制子很特别,因为它是唯一一个可以从较小的构建块自发形成的。所以我们给它一个生成率。这应该非常罕见,所以我们将形成几率设置为每个时间步1%。请记住,这些数字是我们随意设定的,模拟纯粹是说明性的。

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To simulate what a replicator battle might look like, let's assign simplified traits to each of the replicators, starting with the first one. This replicator is special, since it's the only one that can form spontaneously from smaller building blocks. So we'll give it a spawn rate. This should be quite rare, so let's set the chance of formation to 1% per time step. Just keep in mind we're just making these numbers up. The simulation is purely illustrative.

现在,一旦复制子生成,假设它受三个关键特性支配。首先是死亡率,即每个时间步它分解或被摧毁的几率。我们将其设置为2%。其次是复制率,即每个时间步复制自身的几率。我们设为4%。最后是突变率,即副本出现突变的几率。如果突变率为4%,大约每25个副本中就会有一个突变。所以每次新的突变生成时,它都会继承其父代的复制、死亡和突变统计数据,但会略微随机化。请注意,我们不会给这些次级复制子任何生成率。它们只能作为前几代的突变而形成。所以如果它们的所有副本都消亡了,它们就永远消失了。

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Now, once the replicator spawns, let's say it's governed by three key traits. First, a death rate, the chance of it falling apart or being destroyed with each time step. Let's set that to be, say, 2%. Second, a replication rate, the chance to copy itself with each time step. Let's say 4%. And finally, a mutation rate, the chance a copy comes out mutated. If it's 4%, roughly one in 25 copies will be a mutation. So every time a new mutation spawns, it will inherit the replication death and mutation stats from its parent, but slightly randomized. Notice that we won't give any of these secondary replicators a spawn rate. They'll only be able to form as mutations from previous generations. So if all of their copies die out, they'll be gone for good.

现在,在我们运行模拟之前,我想快速感谢YouTube频道Primer。我们的设置灵感来自他关于演化生物学的精彩深入模拟。你真的应该去看看他的频道。好的,让我们运行它。右边的图表将显示种群如何增长,左边的框将显示虚空的一个切片,其中包含所有获胜的复制子和正确的比例。

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Now, before we run the simulation, I want to quickly shout out the YouTube channel Primer. Our setup was inspired by his amazing in-depth simulations on evolutionary biology. You should really check him out. Okay, let's run it. The graph on the right will show how the populations grow, and this box on the left will show a slice of the void, with all the winning replicators and the correct ratios.

你可以看到第一个复制子出现然后立即消失,因为它恰好在有机会复制之前就死亡了。但这没关系。原始复制子可以由较小的团块创建,所以它会在某个时候回来。这次,它开始起飞。你也可以看到它生成了一些突变,但它们很难跟上。然而,最终,更优秀的突变出现并开始比原始复制子更快地复制。但你可以看到几乎所有这些突变都在指数级增长,这是不现实的。那是因为我们缺少模拟的最后一部分:有限的资源。构建块最终应该会耗尽。

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You can see how the first replicator appears and then immediately disappears, because it just happened to die before it got the chance to replicate. But that's okay. The original replicator can be created from smaller blobs, so it'll come back at some point. This time, it's starting to take off. You can also see that it spawns some mutations, but they're struggling to keep up. Eventually, though, superior mutations pop up and start to replicate faster than the original. But you can see almost all of them are growing exponentially, which is unrealistic. That's because we're missing the final piece of our simulation, limited resources.

我们可以通过为每个物种的复制率引入一种资源因子来模拟这种效应。这个因子应该取决于虚空中复制子的总数N,它也将与一个任意的拥挤因子C相除。C让我们定义我们允许进入虚空的最大复制子数量。假设C是10,000。那么一旦有10,000个复制子,这两个项就会抵消,并将复制率降至零,这意味着在种群再次下降之前,没有任何复制子能够制造副本。所以让我们看看这如何改变我们的模拟。

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The building blocks should eventually run out. We can simulate this effect by introducing a sort of resource factor to each species' replication rate. This factor should depend on the total number of replicators in the void, N, which will also divide with an arbitrary crowding factor, C. C lets us define the maximum number of replicators we'll allow into the void. Say C is 10,000. Then once there are 10,000 replicators, the two terms cancel out and drive the replication rate down to zero, meaning none of the replicators will be able to make copies until the population drops again. So let's see how this changes our simulation.

好的。和上次一样,原始复制子开始增长,之后很快被它的突变体取代,但这次,大多数这些突变种群开始下降。由于资源稀缺,新的最佳种群,即柠檬色种群,实际上开始从其他种群那里窃取资源。之后,又出现了一些突变,甚至比柠檬色种群更强大。最终,紫色复制子占据了主导地位,占据了10,000个可用空间中的大约9,000个。它完全抑制了所有其他种群。

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Okay. Like the last time, the original replicator starts to grow, after which it's quickly taken over by its mutations, but this time, most of these mutation populations start to decline. Because of the scarce resources, the new best population, the lime one, actually starts stealing resources from the others. After that, a few more mutations pop up, even more powerful than the lime. Ultimately, the purple replicator takes over, occupying around 9,000 of the 10,000 available spaces. It completely curbs all the other populations.

不言而喻,环境在哪个复制子获胜中扮演着巨大角色。如果你改变环境,你很可能会改变结果。但让我们看看这次获胜的复制子的统计数据。那个获胜物种的复制率为20%,而所有种群的平均复制率为17%。显然,能够快速复制在这里是有回报的。它的死亡率低于平均水平。分解速度较慢的复制子可以制造更多副本。最后,它的突变率为1%,而平均突变率为3.73%。尽管突变通过注入多样性有所帮助,但对于任何单一物种来说,更少的突变意味着更忠实的副本。

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It goes without saying that the environment plays a massive role in which replicator wins. If you change the environment, you likely change the outcome. But let's look at the stats of the replicator that came out on top this time. That winning species has a replication rate of 20%, compared to the 17% average across all populations. Obviously, being able to replicate quickly pays off here. Its death rate is below average. Replicators that fall apart less quickly can make more copies. And finally, it has a 1% mutation rate, compared to the average of 3.73%. Although mutations help by injecting diversity, for any single species, fewer mutations mean more faithful copies.

如果我们重新运行模拟,你会注意到结果总是略有不同,但获胜物种始终具有高复制率和低死亡率、低突变率。

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If we rerun the simulation, you'll notice the outcomes are always slightly different, but the winning species consistently have high replication and low death and mutation rates.

从简单化学到生存机器的崛起

在真实的虚空中,事情不会那么简单。复制子不必仅仅调整这三个统计数据,它们必须以各种不同的方式突变以获得优势。例如,一个复制子可能会突变出一种特性,使其能够摧毁其他个体,然后利用它们的构建块来制造更多自身的副本。这看起来像是一种策略,但它实际上只是化学反应,因为有助于复制子生存而不断被复制。

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Now, in the real void, things wouldn't have been as simple. Instead of just tweaking these three stats, the replicators would have to mutate all sorts of different ways to gain an advantage. For example, one replicator might mutate a trait that lets it destroy other individuals and then use their building blocks to make more copies of itself. This looks like strategy, but it's really just chemistry that gets copied over and over because it helps the replicator survive.

自然地,攻击的风险可能会有利于导致防御的突变。因此,一个对立的复制子可能会偶然发现一个突变,帮助它利用附近的材料形成保护屏障,使其能够抵御这些攻击。这些屏障还将有助于保护脆弱的复制子免受环境损害,例如紫外线。这标志着一个重要的门槛。复制子的特性不再局限于仅仅决定分子本身的属性,它们还可以塑造环境。

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Naturally, a risk of offense would likely favor mutations that result in defense. So an opposing replicator might stumble upon a mutation that helps it form protective barriers from nearby materials, letting it endure those attacks. These barriers would also help protect the fragile replicators from environmental damage, like UV light. This marks an important threshold. The replicator's traits aren't limited to just determining the properties of the molecules themselves. They can also shape the environment.

因此,偶然地,复制子不可避免地以某种方式突变,在自身周围构建支架,以增加其生存的机会。它们偶然发现了制造结构以推动自身移动的方式。它们发展出感官和储存能量的方式。它们甚至相互混合、交换和窃取特性。经过数十亿年的反复试验,这种支架变得越来越复杂,结果,复制子与虚空的互动变得极其间接。

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So by chance, the replicators inevitably mutate in ways that build scaffolding around themselves to increase the chances of their survival. They stumble upon ways of making structures to propel themselves around. They develop senses and ways of storing energy. They even mix, exchange, and steal traits from each other. Through billions of years of trial and error, this scaffolding gets more and more complex, and as a result, the replicator's interactions with the void become exceedingly indirect.

它们为自己建造了复杂的生存机器,这些机器的唯一目的是保护内部的复制子。这些机器在生存方面变得如此专业,以至于它们在约40亿年后仍然存在。它们就是你周围的细菌、植物、真菌和动物。所有活着的生物,包括你,都是作为这些复制子的生存载体而建造的。

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They build complex survival machines for themselves, machines whose sole purpose is to protect the replicators inside. These machines became such experts at surviving, they're still around some 4 billion years later. They are the bacteria, plants, fungi, and animals all around you. Everything alive, including you, was built as a survival vessel for these replicators.

但今天,你几乎认不出它们是复制子了。现在我们称它们为基因(Gene: 携带遗传信息的DNA片段)。它们隐藏在每个活着的生物深处,是由A、T、G和C核苷酸(Nucleotide: 构成DNA和RNA的基本单位)序列组成的DNA(Deoxyribonucleic Acid: 脱氧核糖核酸,生物体的主要遗传物质)链。

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But today, you'd barely recognize them as replicators. Now we just call them genes. They're hidden deep within every living creature, strands of DNA made from the sequences of A, T, G, and C nucleotides.

现在,一个主要的理论是,那些最早的复制子实际上更接近RNA(Ribonucleic Acid: 核糖核酸,在基因表达中起作用的遗传物质)分子,但随着时间的推移,这一定演化成了一个更稳定的信息存储系统,即我们今天使用的DNA和蛋白质。它们是塑造我们特性的代码。我们被教导说,这些特性仅仅是为了帮助确保我们的生存,个体或物种的生存。但我们是不是把这个搞反了?

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Now, one of the leading theories is that those earliest replicators were actually something closer to RNA molecules, but then over time, this must have evolved into a more stable system of storing information, the DNA and proteins we use today. They are the code that shapes our traits. We’re taught that these traits are here solely to help ensure our survival the survival of the individual or the species. But do we have this the wrong way around?

当你生孩子时,你传递了什么?DNA,基因。是的,基因。这些微小的复制子仍在进行数十亿年前开始的相同战斗,其背后的逻辑没有改变。特性只是变得更加复杂。产生不适应环境特性的复制子往往变得不那么常见,而产生有利特性的复制子在种群中变得更加普遍。所以,这无关乎最适应的个体或群体,它从根本上是关于最适应的基因的生存。它们是自然选择的核心单位。

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When you have a child, what do you pass on? The DNA. The DNA, the genes. Yeah, the genes. Genes. These tiny replicators are still fighting the same battle that started billions of years ago, and the logic behind them hasn't changed. The traits just become more convoluted. Replicators that produce traits poorly suited to their environment tend to become less common, while those that produce advantageous traits become more numerous in the population. So it's not about the fittest individual or group, it's fundamentally about the survival of the fittest genes. They are the core unit of natural selection.

基因视角下的演化

但为什么自然选择会精确地关注基因呢?为什么不是更小的东西或更大的东西?嗯,要进行选择,它需要具备三个特征。首先,它需要能够制造几乎完全相同的副本。其次,它需要表现出影响其与环境互动,从而影响复制子生存和繁殖概率的特性。

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But why would natural selection care exactly for the gene? Why not something smaller or something bigger? Well, for something to undergo selection, it needs to have three characteristics. First, it needs to be able to make near identical copies of itself. Second, it needs to exhibit traits that affect its interaction with the environment which, third, affect the probability of survival and reproduction of the replicator.

像单个核苷酸这样小的东西不起作用,因为它确实会制造自身的相同副本,但单独来看,它不表现出可以被选择的特性。那么像染色体(Chromosome: 细胞核中携带基因的结构)这样大的东西呢?嗯,每个染色体可能影响数千个可能影响其生存的特性,但当大多数生物繁殖时,染色体的片段会交换。所以染色体不会作为一个有凝聚力的复制单位保持在一起,因此它不能被选择。但基因介于两者之间。它是一段足够长的DNA,可以独立影响一个特性,但它也足够短和稳定,可以忠实地复制到未来的世代中。这就是为什么基因是自然选择的单位。

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Something small like a single nucleotide doesn't work, because, sure, it'll make identical copies of itself, but alone, it doesn't exhibit a trait that could be selected for. What about something bigger, like a chromosome? Well, each chromosome affects potentially thousands of traits that could influence its survival, but when most creatures reproduce, sections of chromosomes get swapped around. So a chromosome doesn't stay together as a cohesive replicating unit, and therefore it can't be selected for. But a gene is somewhere in the middle. It's a long enough stretch of DNA that it can independently influence a trait, but it's also short and stable enough to be faithfully copied over into future generations. This is why the gene is the unit of natural selection.

这种观点导致了看待演化最强大和最具争议的方式之一,由理查德·道金斯(Richard Dawkins: 英国演化生物学家、科普作家)在他的著作《自私的基因》(The Selfish Gene: 理查德·道金斯于1976年出版的演化生物学著作,阐述了基因中心演化论)中推广。它基于1960年代和1970年代演化生物学家的工作,并作为对当时非常流行的群体选择理论的回应。

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This perspective led to one of the most powerful and controversial ways of seeing evolution, one popularized by Richard Dawkins in his book The Selfish Gene. Based on the work of evolutionary biologists in the 1960s and 1970s. And as a response against the, then very popular, group selection theory.

道金斯认为,几乎所有的特性,从动物互相帮助到完全自私,都是帮助它们的基因生存和复制的策略。那些最大化自身生存的基因是传播最好的基因,即使它们是以牺牲他人为代价的。或者用道金斯的话说,我们是生存机器,是被盲目编程来保存被称为基因的自私分子的机器人载具。

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Dawkins argued that just about every trait, from animals helping each other to being completely selfish, is a strategy that helps their genes survive and replicate. Genes that maximize their own survival are the genes that propagate best, even if they do so at the expense of others. Or in Dawkins' words, we are survival machines, robot vehicles blindly programmed to preserve the selfish molecules known as genes.

你可能认为这个框架并没有那么具有开创性。例如,以南极的帝企鹅为例。它们会犹豫不决地跳入水中,直到确定周围没有海豹。那么什么样的基因可以帮助企鹅在这种环境中生存呢?如果企鹅的基因组使其更有可能胆怯,企鹅可能会退缩,直到有更勇敢的企鹅试水。这样,企鹅被吃掉的风险更低,有更好的机会生存、繁殖并传递其“胆怯”基因。在这里,你可以将其视为“胆怯基因帮助企鹅”或“企鹅帮助胆怯基因”。两种说法都行。

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Now, you might think this framework isn't all that groundbreaking. I mean, take the emperor penguins in Antarctica for example. They hesitate to jump into the water until they are sure there are no seals around. So what kind of genes could help a penguin survive in this environment? Well, if the penguin’s set of genes make it more likely to be timid, the penguin might stay back until someone braver tests the water. That way, the penguin is at a lower risk of being eaten, and has a better chance to survive, reproduce and pass on its ‘timid’ genes. Here, you can think about this either as ‘the timid genes help the penguin’ or ‘the penguin helps the timid genes’. Either way works.

亲缘选择:利他行为的解释

那么,从基因的角度看待事物有什么真正的好处吗?看看当你使用这两个框架来解释自然界中许多地方出现的利他行为时会发生什么。以加州地松鼠为例。如果它们发现捕食者,比如狐狸或鹰,雌性会发出警报声来警告附近的其他松鼠,即使这会危及自己的生存。影响这种行为的基因肯定对松鼠没有帮助。但松鼠能帮助这些基因吗?

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So is there any real benefit to viewing things from the gene's perspective? Well, look at what happens when you use these two frameworks to explain altruistic behavior, which appears in a lot of places in nature. Take California ground squirrels for example. Females will let out alarm calls if they spot a predator, like a fox or a hawk, to warn other nearby squirrels, even though this puts her survival at risk. The genes influencing this behavior surely don’t help the squirrel. But can the squirrel still help the genes?

如果你考虑到大多数生物都是有性繁殖的,这会更清楚。松鼠会从母亲那里获得一半的DNA,从父亲那里获得一半的DNA。所以它实际上与每个父母共享一半的基因。而且,它生的任何孩子,它也会与孩子共享一半的基因,也与任何兄弟姐妹共享。但如果你再进一步到叔叔或祖父母,那么它共享四分之一,再进一步就是八分之一。总而言之,你与你的直系亲属共享很多基因。而加州地松鼠,尤其是雌性,它们生活在家庭附近。

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I think this is a bit more clear if you think about the fact that most living things reproduce sexually. So a squirrel will get half its DNA from its mom and half from its dad. So it's actually sharing half its genes with each parent. But also, any child that it has, it's also going to share half of its genes with the child, but also any siblings. But then if you take a step out to an uncle or up to a grandparent, then it's sharing one-quarter, and then another step out is one-eighth. All to say, you share a lot of genes with your immediate family. And California ground squirrels, females in particular, they live around family.

所以,如果一只松鼠拥有一组基因,使其在发现捕食者时发出警报,那么听到它警告的松鼠很有可能也携带着这些基因。现在,由于它的警报声,假设这只松鼠吸引了捕食者,最终被吃掉了。这个行为使“呼叫”基因失去了将自身传递给这只松鼠未来后代的机会。但是,如果警报声挽救了至少2个这些基因的副本,在松鼠的两个亲属身上……那么,总的来说,这两只松鼠比那只单独的松鼠有更好的机会通过它们的后代传递基因。从基因的角度来看,这可能是一个好的权衡。

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So if a squirrel has a set of genes that make her call out when it spots a predator, there is a very good chance that the squirrels that hear her warning call also carry those genes. Now, as a result of her alarm call, let's say the squirrel attracts a predator her way, and it ends up getting eaten. This action cost the ‘call’ genes the chance to pass themselves on to any future offspring of that squirrel. But, if the warning call saved at least 2 copies of those genes in two of the squirrel’s relatives… well then, in total, these 2 squirrels have a better chance of passing on the genes through their offspring than the single squirrel did. From the gene's perspective, this could be a good trade-off.

哪个个体帮助基因复制并不重要,重要的是尽可能多的副本能够存活下来。这个原则,即利他地帮助你的近亲有助于保存你自己的基因,被称为亲缘选择(Kin Selection: 一种演化策略,指个体通过帮助亲属的生存和繁殖来间接传递自己的基因)。在亲缘选择下,任何利他姿态的回报都严重取决于你与你帮助的个体之间的亲缘关系,因为亲缘关系越远,你与另一个人共享特定基因的机会就越小。你可以在自然界中看到这一点。不生活在亲属附近的雄性松鼠几乎从不发出警报声。

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It doesn’t matter which individual helps the genes replicate, only that as many copies as possible survive. This principle, that altruistically helping your close relatives helps preserve your own genes, is known as kin selection. And the payoff behind any altruistic gesture under kin selection depends heavily on how related you are to the individuals you're helping, because the less related you are, the smaller the chances that you will share that particular gene with another individual. And you can see this in nature. Male squirrels that don't live near relatives almost never give out warning calls.

《自私的基因》理论的挑战与细微之处

现在,这种以基因中心的观点仍然需要解决一个大问题。如果选择真的偏爱那些复制良好的基因,那么为什么有性繁殖会作为一种复制方式演化出来,如果它会丢弃大约一半的基因呢?大多数动物都是有性繁殖。那么为什么这样做呢,当某些生物,如某些植物和真菌,可以通过无性繁殖传递所有基因时?从基因的角度来看,这似乎是一个更好的选择。

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Now, there is a big question this gene-centric view still has to address. If selection really favors genes that replicate well, then why would sex ever evolve as a means of replication, if it throws away roughly half the genes? Most animals reproduce sexually. So why do it, when some organisms, like certain plants and fungi, get to pass on all of their genes through asexual reproduction? From a gene's perspective, this seems like a much better deal.

谈到有性繁殖,人们喜欢说:“好吧。它混合了基因。就像洗牌一样,这难道不是更有利于创造更多变异吗?显然,这是有利的。”另一种解释是,如果调节有性繁殖的基因从有性复制中受益,那么它们就会继续推动这些基因。即使这对基因组中的所有其他基因来说都是负面的。所以如果它对它们有利,它们就会继续推动它。

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When it comes to sexual reproduction, people like to say, "Okay. Well, it mixes up the genes. It's like shuffling a deck of cards, and isn't that better for creating more variation? And clearly, that's advantageous." Another way this has been explained is if the genes that regulate sexual reproduction benefit from replicating sexually, then they're going to keep pushing for these genes. Even if it's a net negative to all the other genes in the genome. So if it benefits them, they'll keep pushing for it.

那么,《自私的基因》在解释自然选择方面有什么问题吗?嗯,是的。这个框架伴随着很多争议。对《自私的基因》最大的批评之一是它很少留下偶然性。它暗示基因组中存在的每个基因都是因为经过多代自然选择而被积极选择的。但许多基因实际上对自然选择是不可见的,因为它们在种群中并不表现出有意义的特性。然而,它们仍然可以随着时间演化。

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So are there any problems with how The Selfish Gene explains natural selection? Well, yes. It turns out the framework comes with a lot of controversy. One of the biggest criticisms against The Selfish Gene is that it leaves little to chance. It implies that every gene present in the genome is there because it actively got selected for, by natural selection, over many generations. But many genes are actually invisible to natural selection, because they don't really exhibit meaningful traits in the population. Yet, they can still evolve over time.

想象20条盲洞鱼,10条绿眼睛,10条蓝眼睛。由于它们是盲的,我们假设它们的眼睛颜色特性对它们的生存没有影响,所以它们纯粹是偶然地遗传下去。现在,为了形成下一代,随机“选择”第一组中的任何一条鱼并复制它。如果你重复20次,你就会得到第二代。仅仅是偶然,一种颜色可能会比另一种颜色出现得更频繁。如果你重复这个过程多代,一种颜色最终可能会完全占据主导地位。不是因为它更好,而纯粹是由于随机抽样。

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Imagine 20 blind cave fish, 10 with green eyes and 10 with blue. Since they’re blind, we’ll assume that their eye color traits make no difference to their survival so they get passed down purely by chance. Now, to form the next generation, randomly “pick” any fish from the first group and replicate it. If you repeat this 20 times, you get a 2nd generation. By chance alone, one color will probably appear more often than the other. And if you repeat this process over many generations, one color might eventually completely take over. Not because it’s better, but purely due to random sampling.

这种基因变异频率的变化被称为遗传漂变(Genetic Drift: 种群中基因频率因随机事件而发生变化的现象)。它在小种群中和那些未被自然选择筛选的特性中最为明显。但它不仅适用于沉默基因。即使基因表现出有意义的特性,也存在遗传漂变压倒自然选择的可能性,一个适应性较差的基因可能仅仅是偶然地在种群中传播。

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This shift in the frequency of gene variants is called genetic drift. It’s most apparent in small populations and for traits that aren't pruned for by natural selection. But it doesn’t only apply to silent genes. Even when genes exhibit meaningful traits, there is a chance that genetic drift overrides natural selection, and a less fit gene will spread through the population just by chance.

回顾我们的复制子之战。如果我们运行模拟足够多次,有时获胜的基因不会是那些特性最大化自身生存的基因。在这里,你可以看到获胜种群的突变率实际上高于平均水平,这纯粹是偶然。而且平均突变率也高于起始值。这些是简化的例子,但关于演化中有多少是由于自然选择,有多少是由于偶然,存在持续的争论。

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Look back at our replicator battle. If we run our simulation enough times, sometimes the winning gene won’t be the one with the traits that maximize its own survival. Here, you can see that the winning population actually has a higher than average mutation rate, just by chance. And the average mutation rate is also higher than the starting value. These are simplified examples, but there is an ongoing argument about how much of evolution was actually due to natural selection and how much of it was up to chance.

对《自私的基因》的另一个主要批评是“自私”这个词背后不可避免的含义。它似乎暗示基因具有能动性,好像它们知道自己在做什么,并且理解后果,但这只是一个比喻,就像将它们描绘成角色是为了让故事更引人入胜一样。当然,分子不知道自己在做什么。它们不会决定复制或密谋超越其他分子。它们只是根据物理定律做出反应。所以看起来像意图的东西,只是恰好运作良好并传播的简单化学反应。

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Another major criticism of The Selfish Gene is about the unavoidable implication behind the word selfish. It seems to imply that genes have agency, like they know what they're doing and they understand the consequences, but it's only a metaphor, just as portraying them as characters was a way for us to make the story more engaging. Of course, molecules don't know what they're doing. They don't decide to replicate or conspire to out-compete others. They just react according to the laws of physics. So what may look like intention is just simple chemistry that happens to work well and propagates.

但也许最明显和最容易理解的批评是,整个框架过于简化,这是事实。基因比我们想象的要复杂得多。它不像一个基因等于一个特性那么简单。一个基因可以影响许多特性,一个特性也可以被许多基因影响。有些基因完全包含在其他基因中。有些基因抑制或激活其他基因,甚至有些基因似乎不编码任何东西,即所谓的非编码DNA(Non-coding DNA: 不编码蛋白质的DNA序列)。

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But perhaps the most obvious and easiest to understand criticism is that the whole framework is an oversimplification, and that's true. Genes are much more complicated than we thought. It's not as simple as one gene equals one trait. One gene can influence many traits, and one trait can be influenced by many genes. There are genes that are wholly contained within other genes. There are genes that inhibit or activate others, and then there are even genes that seem to not encode for anything, the so-called non-coding DNA.

总而言之,我们对基因还有很多需要学习。更不用说环境本身,比如是热还是冷,或者有多少食物,也会影响不同基因的表达方式。基因远没有它们看起来那么具有决定性!

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All to say, we still have a lot to learn about genes. Not to mention that the environment itself, like whether it's hot or cold, or how much food there is, also affects how different genes get expressed. Genes are much less deterministic than they might seem!

所以你可能会认为单个基因很少会有足够大的影响,以至于自然选择可以直接影响它,但无论途径多么复杂,只要一个基因对其自身的生存和复制有可衡量的影响,它就会受到一定程度的自然选择。当然,整个理论是一种简化,但任何关于自然的理论或框架都是如此。我们在这个视频中涵盖的是该框架的更简化版本,但这并不能抹杀通过这种视角看待世界在帮助我们理解演化过程方面具有的不可思议的力量。

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So you might think that a single gene would rarely have a large enough effect that natural selection can directly impact it, but it doesn't matter how convoluted the pathway is. If a gene has a measurable effect on its own survival and replication, it will be subject to some amount of natural selection. And surely, the whole theory is a simplification, but any theory or framework of nature is. And what we're covering in this video is an even more simplified picture of that framework, but that doesn't take away the fact that viewing the world through this lens has an incredible power to help us understand the process of evolution.

它帮助我们理解为什么我们在世界上看到如此多样化的行为,因为从根本上说,这些特性往往会导致它们所关联的基因的流行度增加。这就像整个重点是找出真相。达到真相。对我来说,这是演化的基本真相。

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It helps us understand why we see such a range of different behaviors in our world because fundamentally, those traits tend to cause the increasing prevalence of the genes they are associated with. It's like the whole point is figure out what's true. Get to the truth. And this, to me, is the baseline truth of evolution.

这就是我喜欢制作Veritasium的原因,我们可以深入挖掘和剖析。这也是我喜欢阅读《自私的基因》这本书的原因,它真的让我大开眼界。以前,我可能总是从个体的层面思考,但从基因的层面思考更有意义。你和所有其他生物体都被每个细胞深处的某些分子驱动着的感觉,从根本上令人不安,似乎剥夺了你作为一个行动和思考的个体在世界上的能动性。

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This is what I love about making Veritasium, is that we get to sort of unpack and dig under the hood. And it's what I loved about reading The Selfish Gene book, is that it really opened my eyes to this. Previously, I'd always just probably thought at the level of the individual, but it makes more sense to think at the level of the gene. The feeling that you and every other living organism is being driven by some molecules deep in every cell is fundamentally unsettling, and seems to remove agency from you as an acting, thinking being in the world.

这相当严峻。但无论你是否同意我们可能受基因控制,我们只是它们的血肉机器人这一事实,我认为如果一生都认为每个决定都受此支配,那是不合理和不现实的。它对你没有任何好处,因为我们以个体的身份感知世界。所以我认为将自己视为一个独立的实体,一个独立的单位,是非常有益的。

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But whether or not you agree with the fact that we might be controlled by our genes and we're simply their flesh robots, I think it's kind of unreasonable and unrealistic to go through life thinking that every decision is governed by this. It doesn't really do you any good, because we perceive the world as individuals. So I think it's very beneficial to see yourself as your own thing, as your own unit.

我要特别感谢BeSmart乔·汉森(Joe Hanson: YouTube频道BeSmart的创作者)帮助我们制作这个视频,并再次感谢Primer(YouTube频道,以其深入的科学模拟视频而闻名)允许我们改编他关于第一个复制子的模拟。我已将他们的频道链接放在描述中,请务必查看。最后,我要向你致以崇高的敬意。感谢你的观看。

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I want to give a big shout-out to Joe Hanson from BeSmart for helping us out with this video, and another shout-out to Primer for letting us adapt his simulation on the first replicators. I have put links to their channels down in the description, so please check them out. And finally, I want to say a huge shout-out to you. Thank you for watching.

📌 文中提及的人物和组织

公司/组织: Hostinger, Veritasium

产品/模型: Chat GPT, Notion

媒体/书籍: The Selfish Gene